BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015E11LP1|AL426867
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1411 1741 0.0
>3x_Contig1411
Length = 7271
Score = 1741 bits (877), Expect = 0.0
Identities = 907/913 (99%), Gaps = 4/913 (0%)
Strand = Plus / Plus
Query: 16 gatctctgtgagcaattgttggattacaggtggtccgtatgcttcttgtccttatcaaaa 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gatctctgtgagcaattgttggattacaggtggtccgtatgcttcttgtccttatcaaaa 235
Query: 76 atacggttctcgaagaaattatattgccatgactgttcctacttcagcgatas-attggt 134
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 236 atacggttctcgaagaaattatattgccatgactgttcctacttcagcgatagcattggt 295
Query: 135 attacttcttgtcattttttacttcaattgggttcacgttcccattcaggacaataggaa 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 attacttcttgtcattttttacttcaattgggttcacgttcccattcaggacaataggaa 355
Query: 195 caactggaaaagaatcattaacgcatattcaaaggaagaggtcgaaggtgttccatcttg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 caactggaaaagaatcattaacgcatattcaaaggaagaggtcgaaggtgttccatcttg 415
Query: 255 aaaggtttgaatttctgaaatactctaaattaaacaacgtacaactatataagctacacc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaaggtttgaatttctgaaatactctaaattaaacaacgtacaactatataagctacacc 475
Query: 315 aaaactagctattctaaccgctcagcg-tacgatggtatcctagccggattagcatacct 373
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 476 aaaactagctattctaaccgctcagcggtacgatggtatcctagccggattagcatacct 535
Query: 374 gataactttacgtattaaccttttcctcttaaattgatcatctaccagataatccccttc 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gataactttacgtattaaccttttcctcttaaattgatcatctaccagataatccccttc 595
Query: 434 tattctcgtcatttctaatcctctctcagtggcccattgttccacgttggtgtcggtagt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tattctcgtcatttctaatcctctctcagtggcccattgttccacgttggtgtcggtagt 655
Query: 494 ccattcggagtttgagtcaaacgtccatgtcggaggtggctttaagtcgtccatactgtg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ccattcggagtttgagtcaaacgtccatgtcggaggtggctttaagtcgtccatactgtg 715
Query: 554 cgctcctggcggtggtttttgagattttctatacggatcagatttgtcaaagacctgtgt 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 cgctcctggcggtggtttttgagattttctatacggatcagatttgtcaaagacctgtgt 775
Query: 614 ggagtacatatagggtgaccattcttgctccgtgataccttgcatttggatctcaaatac 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ggagtacatatagggtgaccattcttgctccgtgataccttgcatttggatctcaaatac 835
Query: 674 ctctacccaccttgtctccacaggttcatccaatagaatgtcataacgttccgttctcct 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ctctacccaccttgtctccacaggttcatccaatagaatgtcataacgttccgttctcct 895
Query: 734 gagagcttctttccccttatccagttgttctttcttcaacaatccaaatactgtaggacg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gagagcttctttccccttatccagttgttctttcttcaacaatccaaatactgtaggacg 955
Query: 794 aactcggggatgtatgatggtcataatagaccatgccagcaagctcgccatgagacccca 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 aactcggggatgtatgatggtcataatagaccatgccagcaagctcgccatgagacccca 1015
Query: 854 attaataaacggagttattatccacaataagaataaga-cacaaaacaggagagg-aaam 911
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1016 attaataaacggagttattatccacaataagaataagaccacaaaacaggagaggaaaac 1075
Query: 912 aactgttgaatat 924
|||||||||||||
Sbjct: 1076 aactgttgaatat 1088
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6104
Number of Sequences: 1807
Number of extensions: 6104
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)